Writing checkpoint, step 4745770 at Thu Sep 25 12:33:01 2008
[10:42:51] Completed 247509 out of 250000 steps (99%)
Writing checkpoint, step 4748360 at Thu Sep 25 12:48:00 2008
Writing checkpoint, step 4750001 at Thu Sep 25 12:57:20 2008
Writing final coordinates.
Average load imbalance: 92.3 %
Part of the total run time spent waiting due to load imbalance: 53.1 %
Steps where the load balancing was limited by -rdd, -rcon and/or -dds: Z 0 %
Parallel run - timing based on wallclock.
NODE (s) Real (s) (%)
Time: 123861.000 123861.000 100.0
1d10h24:21
(Mnbf/s) (GFlops) (ns/day) (hour/ns)
Performance: 28.626 4.390 0.349 68.812
gcq#0: Thanx for Using GROMACS - Have a Nice Day
[10:58:21]
[10:58:21] Finished Work Unit:
[10:58:21] - Reading up to 21141072 from "work/wudata_01.trr": Read 21141072
[10:58:21] trr file hash check passed.
[10:58:21] - Reading up to 4411148 from "work/wudata_01.xtc": Read 4411148
[10:58:21] xtc file hash check passed.
[10:58:21] edr file hash check passed.
[10:58:21] logfile size: 184405
[10:58:21] Leaving Run
[10:58:23] - Writing 26017169 bytes of core data to disk...
[10:58:23] ... Done.
Error encountered before initializing MPICH
[10:58:26] - Shutting down core
[10:58:26]
[10:58:26] Folding@home Core Shutdown: FINISHED_UNIT
[11:01:05] ***** Got an Activate signal (2)
[11:01:05] Killing all core threads
Folding@Home Client Shutdown.
folding@folding2:~/folding/fah$ ./fah6 -forceasm -smp -verbosity 9
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
2 cores detected
--- Opening Log file [September 25 11:01:50]
# SMP Client ##################################################################
###############################################################################
Folding@Home Client Version 6.02
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/folding/folding/fah
Executable: ./fah6
Arguments: -forceasm -smp -verbosity 9
Warning:
By using the -forceasm flag, you are overriding
safeguards in the program. If you did not intend to
do this, please restart the program without -forceasm.
If work units are not completing fully (and particularly
if your machine is overclocked), then please discontinue
use of the flag.
[11:01:50] - Ask before connecting: No
[11:01:50] - User name: [UB]seagull (Team 34517)
[11:01:50] - User ID: 1A231FF756929552
[11:01:50] - Machine ID: 1
[11:01:50]
[11:01:50] Loaded queue successfully.
[11:01:50] Unit 8's deadline (September 22 08:25) has passed.
[0]1:Return code = 0, signaled with Interrupt
[11:02:04] - Warning: Could not delete all work unit files ( 8 ) : Core file absent
[11:02:04] Unit 9's deadline ( September 25 08:28 ) has passed.
[0]0:Return code = 18
[0]1:Return code = 18
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 0, signaled with Quit
[11:06:25] - Warning: Could not delete all work unit files (9) : Core returned invalid code
[11:06:25] - Autosending finished units...
[11:06:25] Trying to send all finished work units
[11:06:25] + Attempting to send results
[11:06:25] - Reading file work/wuresults_00.dat from core
[11:06:25]
[11:06:26] + Processing work unit
[11:06:26] Core required: FahCore_a2.exe
[11:06:26] Core found.
[11:06:26] (Read 49190318 bytes from disk)
[11:06:26] Connecting to
http://171.64.65.56:8080/
[11:06:26] Working on Unit 01 [September 25 11:06:26]
[11:06:26] + Working ...
[11:06:26] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -suffix 01 -checkpoint 15 -forceasm -verbose -lifeline 30887 -version 602'
[11:06:26]
[11:06:26] *------------------------------*
[11:06:26] Folding@Home Gromacs SMP Core
[11:06:26] Version 2.01 (Wed Aug 13 13:11:25 PDT 2008)
[11:06:26]
[11:06:26] Preparing to commence simulation
[11:06:26] - Ensuring status. Please wait.
[11:06:36] - Assembly optimizations manually forced on.
[11:06:36] - Not checking prior termination.
[11:06:36]
[11:06:36] Project: 0 (Run 0, Clone 0, Gen 0)
[11:06:36]
[11:06:36] Error: Could not write local file. Exiting.
[11:06:36] - Shutting down core
[11:17:04] ***** Got an Activate signal (2)
[11:17:04] Killing all core threads
Folding@Home Client Shutdown.
folding@folding2:~/folding/fah$ ./fah6 -forceasm -smp -verbosity 9
Note: Please read the license agreement (fah6 -license). Further
use of this software requires that you have read and accepted this agreement.
2 cores detected
--- Opening Log file [September 25 11:17:21]
# SMP Client ##################################################################
###############################################################################
Folding@Home Client Version 6.02
http://folding.stanford.edu
###############################################################################
###############################################################################
Launch directory: /home/folding/folding/fah
Executable: ./fah6
Arguments: -forceasm -smp -verbosity 9
Warning:
By using the -forceasm flag, you are overriding
safeguards in the program. If you did not intend to
do this, please restart the program without -forceasm.
If work units are not completing fully (and particularly
if your machine is overclocked), then please discontinue
use of the flag.
[11:17:21] - Ask before connecting: No
[11:17:21] - User name: [UB]seagull (Team 34517)
[11:17:21] - User ID: 1A231FF756929552
[11:17:21] - Machine ID: 1
[11:17:21]
[11:17:21] Loaded queue successfully.
[11:17:21] - Autosending finished units...
[11:17:21] Trying to send all finished work units
[11:17:21] + Attempting to send results
[11:17:21] - Reading file work/wuresults_00.dat from core
[11:17:21]
[11:17:22] (Read 49190318 bytes from disk)
[11:17:22] Connecting to
http://171.64.65.56:8080/
[11:17:22] + Processing work unit
[11:17:22] Core required: FahCore_a2.exe
[11:17:22] Core found.
[11:17:22] Working on Unit 01 [September 25 11:17:22]
[11:17:22] + Working ...
[11:17:22] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a2.exe -dir work/ -suffix 01 -checkpoint 15 -forceasm -verbose -lifeline 30948 -version 602'
[11:17:22]
[11:17:22] *------------------------------*
[11:17:22] Folding@Home Gromacs SMP Core
[11:17:22] Version 2.01 (Wed Aug 13 13:11:25 PDT 2008)
[11:17:22]
[11:17:22] Preparing to commence simulation
[11:17:22] - Ensuring status. Please wait.
[11:17:31] - Assembly optimizations manually forced on.
[11:17:31] - Not checking prior termination.
[11:17:31]
[11:17:31] Project: 0 (Run 0, Clone 0, Gen 0)
[11:17:31]
[11:17:31] Error: Could not write local file. Exiting.
[11:17:31] - Shutting down core